Fix standalone running of glassfish
Implement variable expansion of ini maps.
Use new variable expansion.
Remove admin web service from seqware web service
Merge pull request #124 from SeqWare/feature/SEQWARE-1093_checkdb

Feature/seqware 1093 checkdb
Better tests for variable expansion.
Update tests after changing 'date' var generator.
Add name and version to output when installing workflow.  Update ETs to use same SWID extraction function.
Merge pull request #136 from SeqWare/feature/SEQWARE-1222

Add name and version to output when installing workflow.  Update ETs to ...
Merge pull request #135 from SeqWare/feature/ini-vars

Feature/ini vars
Allow dev to control qsub options.
Add doc.
Refactor to clearly delineate generated and custom code in case we need to re-generate due to database changes

Conflicts:
	seqware-admin-webservice/src/main/java/io/seqware/webservice/controller/CustomWorkflowRunFacadeREST.java
	seqware-admin-webservice/src/main/java/io/seqware/webservice/controller/ModelAccessionIDTuple.java
	seqware-admin-webservice/src/main/java/io/seqware/webservice/generated/client/SeqWareWebserviceClient.java
	seqware-pipeline/src/main/java/net/sourceforge/seqware/pipeline/plugins/deletion/DeletionDB.java
Document quirk with VB network settings.
Add docs for new sqw.* vars.
Formatting code.
Wait for oozie job info to be available.
Fix markup.
Use built version of sample ini, that omits the build-time variables replaced by maven.
Correct the doc about legacy vars.