Update test files for incoming manifest functionality.
Create files, add TODOs for each branch's code
Mark out test files for implementation
Change www.cache to use file md5s for #103 #111
Remove obsolete PageTool related code.
Add more tests
Implement JavaScript server-side require with unit tests.

Closes #111.
Merge branch '111-JavaScriptRequire' into daily

Conflicts:
	Test/PhpUnit-JUnit.xml
	Test/PhpUnit.json
	Test/PhpUnit.tap