New solver and infrastructure for solving MDAs.

1. New Workflow CyclicWorkflow allows the specification of cyclic workflows
 - Provides the driver a topological sort after automatically making cutting the loops in a local copy of the graph
 - Provides a method to get the residual vector that contains the residuals at all interior edges.
 - Provides a method to increment the residual vector at all severed edges
 - Provides a callback to perform matrix vector product on the workflow's components using the new derivatives API

2. New Solver for converging systems with cyclic workflows.
 - Implements both Guass-Seidel and Newton-Krylov methods.
 - Uses scipy's GMRES to solve for the jacobian problem
 
3. ComponentWithDerivatives is now deprecated
 - Functionality moved to Component
 - ComponentWithDerivatives exists and gives deprecation warning
 - The check_derivatives capability is not implemented in Component
 - Component now keeps track of derivative function execution (i.e., linearize or calc_*_derivative)

4. New derivatives API for Components
 - linearize will replace calc_first_derivatives, but the latter is still there
 - applyJ allows specification of the product of the local J with an incoming vector
 - User decides how to store his local Jacobian, rather than forcing the use of the derivatives object.

5. Infrastructure changes
 - The "Force=True" attributes of a Variable's set() method now allows you to set a connected output.
 - Workflow base class now has a method to get a set of interior edges
 - The baseline save for fake finite difference is now triggered by the "savebase=True" attribute to calc_derivatives. This prevents unnecessary saving of component data.
 - Assembly now keeps track of its graph loops so that it doesn't try to run the source connections of a component when they are both in the same loop.