commit file
Merge branch 'master' of https://github.com/JnJtranSMART/transmartApp.git
manually add changes for new add-in for svg text wrapping
put back jonathan's last version of this - i messed it up on the
previous merge
Save display style  of boxplots and lineplots prior to drawing; restore
after drawn (need to have the plot visible so that the title heights can
be calculated)
add spacing between plots for Cross Trial Analysis
Gene Sig Enhancements: Improved handling of "click" events on the venn diagram region.
Minimising the use of global variables.
"Dead" regions are now greyed out and not white.
Fixed bugs so code now works with 2 or 3 sets.
add cohort legend for CTA
Gene Sig Enhancements:
- Limit tooltip on mouse hover to show only the first 5 elements
- Bug fixes.
- Optimized how the Venn diagram and user selections are reset.
JNJ-2458 Add gene list label in the gene manipulation Venn diagram
Included labels for the gene lists in the tooltip.
Labels can get very long so showing them in the tooltip (on mouse hover) seems to be the most reliable way to display them.
JNJ-2457 Hide ownership column and store owner user name in the ownership field
The column is now hidden and stores the owner's userId. It is also searchable.
JNJ-2453 Add ability to quickly generate gene list with minimal information.Move all required fields to the first page of the wizard.
Merge branch 'master' of https://github.com/JnJtranSMART/transmartApp
JNJ-2460 Add version and data source fields to the gene signature
JNJ-2461 Add ability for the user to add 5 name/value fields to the gene signature
JNJ-2462 Add field for user that performed QC on the gene signature and record QC timestamp
All fields added to the 3rd page of the wizard.
test commit
JNJ-2458 Add gene list label in the gene manipulation Venn diagram
Removed labels from tooltip and pushed them down into a seperate legend.
Merge branch 'master' of https://github.com/JnJtranSMART/transmartApp
for CTA, determine probe with lowest preferred pvalue or highest fold
change to determine which to use for boxplot (rahter than using average
of all probes for the gene)
Fixed spacing issues on bar plot cross trial graph
Merge branch 'master' of https://github.com/JnJtranSMART/transmartApp.git