NoEnzyme protease is done through Trypsin/P and proper min cleavage setting.
BugzId: 2020
(cherry picked from commit 6189012)
Add a link to Scaffold file in Swift's search function
BugzId: 2072
The file listener runs in separate thread, file checking happens asynchronously.
BugzId: 2527
The scaffold unimod.xml is a file, not executable.
Fixing the timer to work properly when e.g. zero files are waited for.
Merged changes from master
File monitor starts the timer on demand only.