Change structure of SNP hash (pos-id-polymorphism)
Build single SNP hash (w/ both parents)
Rename variables for consistency
Write master_snp_list using single SNP hash
Remove outdated example of SNP hash
Fix path to master SNP lists
Use coverageDB to filter out SNPs based on coverage
Fix bug: Parent 2 wasn't getting filtered coverage low!
Simplify get_cov output
Add TODOs; Cleanup
Add master_snp_list files to .gitignore
Update Usage document
Rename parental_genome_builder_pt1.rnaseq.pl to coverage_filter.pl
Merge branch 'feature/parental-genome-builder' into develop
Update version number in README
Merge branch 'release/0.1.2'