Fixed for loop
Bash script style if/then/fi
Testing MAJOR_r in setup.sh
setup.sh no longer reprepares unnecessary textfiles
setup.sh no longer reprepares unnecessary textfiles
MAJOR_r uses the same ChIP-seq file
Prepares the same ChIP-seq file for MAJOR_r
Distinguish between distances from TTT and FTT cases
Newlines for d TTT and d FTT