Added job class and small script to run a few test jobs
added failed job check
added command file feature for job submit
sample pipeline code with poll dependency and job status based on run tags
Moved api classes to package
Changing the history for the test_api.py file
Merged dev1 with master

Conflicts:
	src/test_api.py
added gitignore file and removed history for test_api.py
Putting passwords in file that is in gitignore
Merge branch 'master' of github.com:iMicrobe/foundation-python

Conflicts:
	src/foundation/FoundationApi.py