added a prototype for metropolis test and changed some stuff in spherical container test
Merge branch 'master' of https://github.com/js850/PyGMIN
Merge branch 'master' of https://github.com/js850/PyGMIN
Merge branch 'master' of https://github.com/js850/PyGMIN
added get_atommasses to rigidbody
Merge branch 'master' of ssh://github.com/js850/PyGMIN
data structures changed between openmm4 and openmm5.
added a check. not the gui should work for both versions.
fixing a typo in previous commit message:
was:
data structures changed between openmm4 and openmm5. added a check. not the gui should work for both versions.
should have been:
data structures changed between openmm4 and openmm5. added a check. NOW the gui should work for both versions.

:-)
first version of normalmode explorer
normal mode browser animation
metric tensor for normal mode browser
angle axis system implements metric tensor
Merge branch 'master' of github.com:js850/PyGMIN
metric tensor in basesystem and cluster
Merge branch 'master' of github.com:js850/PyGMIN
implemented get_metric_tensor for normal mode calculation
(minor) updated comments and log msgs
add module thermodynamics to setup.py
Merge branch 'master' of github.com:js850/PyGMIN
fixed bug with Emax in disconnectivity graph