Bio/PDB/NACCESS: Various NACCESS fixes and unit tests

- os.system(cp/rm) calls converted to correspoding shutils calls.
- os.popen3 and mktemp calls are replaced with subprocess and mkstemp.
- pdb file path is converted to absolute path.
- rsa and asa files added to Tests/PDB directory.
- NACCESS unit tests added.
- NACCESS.py pep8-ified.