transferred project.utils to use mdtraj
mdtraj changes to project.builder
started project.py
finished project.py I'm just using hacky calls to pytables when that provides a significant performance boost (e.g. when loading a single frame or requesting the shape of the trajectory
finished adding mdtraj to validators
added mdtraj to .travis.yml
added simtk.unit to .travis.yml from rmcgibbo's repo
Merge branch 'msmb2.8' of github.com:schwancr/msmbuilder into msmb2.8
Get rid of these
Started to do lprmsd changes but haven't finished
Updated clustering for mdtraj