added a class to add character text to csv output of charaparser
(biocreative 2012 version)
adjust application.properties.
Merge branch 'dev' of https://github.com/phenoscape/phenoscape-nlp.git
into dev

Conflicts:
	phenoscapeII/src/outputter/StateStatementParser.java
	phenoscapeII/src/outputter/XML2EQ.java