[#32523] Update some wrong Docblock packages for phpDocumentor

Update some wrong packages and subpackages of layout, libraries and com_config controller docblock.

And added subpackage to every FOF files that phpDocumentor can make them categorize.

Tracker: http://joomlacode.org/gf/project/joomla/tracker/?action=TrackerItemEdit&tracker_item_id=32523&start=0