This is the newest version of everything so far
Now contains methods within the method list to call for the sorting
algorithm, all wrinkles have not been ironed and I will be attempting to
allow Java to read the files and outputs to import to the other programs
within the chain to complete the analysis. The red marks are due to the
fact i have not imported and read the output from the original source
arrays.
Working on the meethods list by making methods and a=objects where
appropriate
This is it