trinity: new formula: Trinity r2012-10-05

De novo transcriptome assembler for RNA-Seq data
fastqc: new formula: FastQC 0.10.1

A quality control tool for high throughput sequence data.
raxml: new formula: RAxML 7.2.8-ALPHA

Randomized Axelerated Maximum Likelihood is a program for sequential and
parallel Maximum Likelihood based inference of large phylogenetic trees.
gblocks: new formula: Gblocks 0.91b

Selection of conserved blocks from multiple alignments for their use
in phylogenetic analysis
macse: new formula: MACSE 0.9b1

MACSE: Multiple Alignment of Coding SEquences Accounting for
Frameshifts and Stop Codons
Merge branch 'gblocks'
Merge branch 'trinity'
Merge branch 'fastqc'
Merge branch 'raxml'