Experimental: solving for long time states using eigenvalues
Ignoring files from using a fuse file system
Experimental: Added changes to markovian reservoir
Added superoperator generalization of Hamiltonian (still needs inj/depl and eventually interaction)
Debugged superoperator creation, moved superoperator method to separate files, and relocated common functions
Splitting up source files. Added calculations for open systems and systems
requiring a large superoperator. Condensed matrix operations together.
Restructured super-operator construction to avoid N^3 problems.
Added profiling.
Added -Wextra and fixed all instances of unused arguments.
Optimization of memory within the superoperators
Adding ability to tridiagnate as well as solve for steady state in non-linear regimes
Started nonlinear injection steady state solver
Finally update organization file
Update organization