tool now loads annotation file into memory instead of potentially ginormous VCF file. Also sorts the output file.
modified instrumentdata import tcgabam command to optionally take a uuid; added gmt genetorrent to properly run genetorrent in the lims-datatransfer queue to download stuff
Merge branch 'master' of ssh://git/srv/git/genome
tools in progress
lots of changes - better stronger harder faster
merging
tools in progress
lots of changes - better stronger harder faster