pkg2: add filter_prereleases
pkg2/resolve: move version pruning upstream

*) separated Query.dependencies_subset from Query.prune_versions
*) added an optional "fixed" field to Query.filter_prereleases
*) grouped dependencies manipulations into Query.prune_dependencies
*) moved dependencies manipulations from the Interface constructor
   to Pkg2.resolve and inside Pkg2.Resolve.sanity_check
*) minor cosmetic changes

This change is a prodromic to changing the solver's objective function
and have Pkg2.Resolve.resolve be independent of pruning.
pkg2: only use whole version numbers in require

*) Disregard all prerelease/build information in
   require files, e.g. 1.0.0-pre+0.a is parsed as 1.0.0
*) Only use whole version numbers in VersionInterval,
   therefore, if a requirement such as

   FooBar 1.3 2.0

   will be satisfied by FooBar version 1.3-pre2 and
   won't be satisfied by version 2.0-pre1.
pkg2/resolve: introduce VersionWeigths

This changes resolve's objective function such that
version pruning doesn't affect it. Therefore, equivalence
classes are no longer needed in resolve (they're still used
in sanity_check).

With this change, the objective function is defined such that:

1) requirements and dependencies are enforced
2) in case of multiple solutions, required packages versions
   are maximized:
   2a) the overall sum of required packages major versions is
       maximized
   2b) in case of a tie, minor versions are considered; if there
       are still ties, patch versions are considered
3) in case of multiple solutions under the above rules, non-required
   package versions are maximized, still counting major versions
   first, then minor, then patch, as for the required versions.
4) if there is still a tie between different solutions, dependants
   are maximized before dependencies
5) if there is still a tie, random noise is used to pick one

The change introduced by this commit is the major/minor/patch
count. Also, package installation is now considered "cheap", while before
the cost of installing a package was equivalent to that of downgrading
a package.
doc update
Merge pull request #3666 from amitmurthy/amitm/doc

doc update
minor cleanup in addprocs
docs: Fixed newlines in stdlib.parallel section
Merge pull request #3669 from amitmurthy/amitm/mfixup

minor cleanup in addprocs
ignore BOM in source files. fixes #3675
Updated info in README.md

* CentOS 5 building with gcc44
* Ubuntu PPAs
* Troubleshooting table
* Removed Rmath reference
Fix #3668
doc: rename FAQ to faq.md, which IMO is more recognizable.
WINDOWS64: fix llvm build
inline global constants. fixes #3678
fix #3672, dispatch bug due to type intersection

the improved typeintersect revealed a bunch of ambiguity warnings,
which could be fixed up by improving method specificity a bit, and
manually patching one case.
Manually symlink libopenblas.so to libopenblas.so.0 in usr/lib/
Merge pull request #3681 from staticfloat/arpacklinkfix

Manually symlink libopenblas.so to libopenblas.so.0 in usr/lib/
Update OS X build instructions in README.
Return sum of squared residuals from gglse