Preliminary draft for deconseq automated test, still not funcional. @tzcoolman #reviewthis
Merge branch 'master' of https://github.com/SciLifeLab/facs
Deconseq generates a .tsv result file, confusing output dir format
Deconseq first successful run, does not keep .tsv but generates contam and clean
Cleanup/reactivate code for fetching deconseq @tzcoolman #reviewthis
Exec bit for builtin bwa binary
Add deconseq db target
Make it easier to compare FACS and Fastq_screen in single-lib screening @guillermo-carrasco #reviewthis
Deconseq test ready
Remove underscores in report @tzcoolman, @guillermo-carrasco, imho we should delete the databases and start populating them from now on
Test failed trying to install cpanm
Apparently the CASAVA format patch ceased to work... very strange. @guillermo-carasco, maybe EMBL did a silent downgrade of simNGS?
Makefile target to run FACS/deconseq/fastqscreen benchmarks. Div by zero in deconseq contam handling
Removing binary contents in test_fames
Display only datasets with format simngs_org_reads.fastq
Merge pull request #76 from brainstorm/master

FACS, deconseq and fastq_screen are now comparable via CouchDB
commit before pull
merge changes from PR 76