Separate clustering file for force clustering, mostly for plotting purposes
Oh goodness, I have no idea what's changed.
Added the smallest shift function to the cluster object
more thesis figures
Updated clustering shift process to find middle curve and average shift to this, also updated the plotting function but not all functions are optimized yet
Pre changing how node ids are found in the flattening algorith
Updated flatten to have a cluster id function that finds the original ids of each cluster for each curve
Flatten?
Major work to add AnyCluster class to clustering, plus basically finished the Thesis figures - Analysis Outline iPython notebook
split updates and thesis figures