20130722 eth analysis framework json serialization 53261073

Branch with JSON serialization of analysis framework. Also name clean-up and deprecation of unused objects. In particular:

https://www.pivotaltracker.com/story/show/53261073
https://www.pivotaltracker.com/story/show/53967295
https://www.pivotaltracker.com/story/show/52019105

To assist in review, I have kicked off experimental builds on Linux and Windows. Note that there appears to be a platform-specific RunManager problem that is causing analysisdriver test failures on Windows, see #424.