updated workflow submodule to 5853124
updated jenkins submodule to b02fcf4
updated graphite submodule to 633dbaf
modify smallRNA pipeline to be better error-handling
added exception to diff blessed that accounts for changes in
circos.conf
Update CreateMutationSpectrum.pm to use the default version of the GMT Transcript Annotator:wq
Build: Add model_class method
Build: files_ignored_by_diff uses model_class method
Build: add addtional_regex_for_custom_diff call to model class when getting regex_for_custom_diff
Build: look in model class for diff methods if it does not exist in build class
ClinSeq: add custom diff for circos conf
Build: rm circos conf from custom regex diff
ClinSeq: update circos conf diff
updated ur submodule to 356ca1b
updated workflow submodule to 1758ca3
Fix whitespace
Merge branch 'fireteam2' into gb_master
Factored out Workflow portion of build view
Stop referring to self->build in WorkflowMixin
Add Command::V2 to WorkflowMixin

This allows the command line options specified there to get inhertited
by subclasses