I ran:
#!/bin/bash
cd ~/Desktop
git clone https://github.com/adneal/Apollo-CM.git
cd ./Apollo-CM
mkdir Apollo-CM
git mv ./* ./Apollo-CM

#using- http://stackoverflow.com/a/8897149/144020
#git submodule add https://github.com/someuser/somerepo.git somerepo
git submodule add https://github.com/JakeWharton/Android-ViewPagerIndicator.git Android-ViewPagerIndicator
git submodule add https://github.com/JakeWharton/ActionBarSherlock.git ActionBarSherlock
git submodule add https://github.com/keyboardsurfer/Crouton.git Crouton

#then I corrected the project.properties file and made the commit

#you may need to refer to http://stackoverflow.com/a/5828396/144020 to update submodules later