All to All

Modified cluster_rmsd.sh to be an all to all comparison
HBOND - Charge exception

Exclude charge residues which for SC-SC hbonds
Patchy_rama % of points

Modified to give % of points in output.
BUG FIX: ss_rama.pl

Modified to give correct account of time.
Alternate GLY CHa shift

Quick and dirty script to calulate the alternate Glycine CHa shift and
produce and output file with new shifts suitable for block averaging
Match Clusters

Takes output of cluster_rmsd and returns the best match for each
cluster on the left.
Patchy_tail

Short text file to append to patchy_rama.pl output that gives the
correct names for the different lines