ConservedRegionMongoDBAdaptor
ExonMongoDBAdaptor, added, Transcript and Variation Mongo tests added
Some initial work on new QueryResult reponse object
Some initial work on new QueryResult reponse object
Merge form fsalavert
Some code clean up
Main changes include:
 * Now CellBase returns a QueryResponse object containing the results and some metadata
 * QueryOption object can be passed as argument to reduce the number of methods and for code sanity
 * QueryOption object can contain a 'exclude' field, this field must match JSON model to exclude the fields
 * GeneDBAdaptor API has been chenged to accomodate all these changes
Now MongoDB intarfaces and classes return QueryResponse and accept a QueryOptions parameters
renamed test mongo to mongodb
Generic fetaure classStr is now featureClass
executeAggregationList implemented
MongoDBAdaptor earns generic methods to execute MongoDB queries
TfbsDBAdaptor interface done
Transcript aggregation test
Merge branch 'next-mongodb' of git://imedina/cellbase-lib into next-mongodb
compile fix
TfbsMongoDBAdaptor created
Merge branch 'next-mongodb' of git://fsalavert/cellbase-lib into next-mongodb
Tfbs methods and tests implemented
ConservedRegion now has chunkId attribute