added misc details doc
break graph traversal on degree rather than circumference
fixed compiler warning re uninitialized variable
added in formal call to remove ht
added friendlier output + config to extract-partitions
cleaned up header and printed out settings
added degree-splitting functionality, better tested
added explicit gc.collect calls
added debugging message for potential memory overflow
Merge branch 'master' of git@github.com:ctb/khmer into pipeline
extracted threaded sequence processing code; tested; applied to graph-size and filter-degree
keep track of bp removed/etc too
test file and printouts for debugging large tagset problem
shuffled version of sequential test file
shuffle FASTA files
fixed memory leak in trim_on_degree
exit from threadedsequenceprocessor on error
Merge branch 'master' of git@github.com:ctb/khmer into pipeline