Moves all .c files to .cpp
Adds *~ backup filed to the ignore list
Reformats all code for consistency
Converts all .h includes to .hpp
Removes and ignores *_flymake.cpp files
Adds .cpp file extensions and removes C support
Fixes instance of yaml.hpp (should be yaml.h)
Removes mpiMcmc.new.cpp
Removes C compatibility from Settings.cpp and fixes C++11 formatting
Removes extraneous null terminators from fixed strings
Changes char* arguments to const char* to allow fixed string passing
Explicitly adds YAML include dirs to mpiMcmc
Changes some C-style memory management to C++-style
Makes marg.cpp's globalMags and ageLimit extern to reference the ones in evolve.cpp
Adds gsl_linalg.h to correct missing reference to linalg_cholesky_decomp
Makes makeCMD compile
Makes makeIsochrone compile
Makes sampleWDMass compile
Makes scatterCluster compile
Makes simCluster compile