APNG: fix row count for images that contain a single byte

Fixes ticket #11421.
PSD: fix 'rgb' flag for images that report themselves as CMYK

Fixes ticket #11475.
TIFF: prevent exception when unpacking truncated strips of < 8 bit data

Fixes ticket #11292.
PNG: fix row copying for < 8 bit images with a width that is not multiple of 8

Fixes ticket #11291.
Fall back on JPEGTurboService if JPEGTileDecoder doesn't work

See ticket #11237.
Add JWlz.jar to loci_tools.jar and the Javadoc classpath
WlzWriter: prevent NPE when converting files without a StageLabel
cpp: Move cmake project root to top level

Moving the toplevel CMakeLists.txt to the project root permits the
project root to be used by cmake directly.  This permits proper
paths to docs, components, etc. to be used.
cpp: Fix comments and indentation
test-build: cpp builds using project root
cpp: Update README to use project root
cmake: Add functional check for cstdint
AIM: add support for v3.0 files, which allow for > 2 GB files

Fixes ticket #11287.

Conflicts:

	components/bio-formats/src/loci/formats/in/AIMReader.java
Merge pull request #747 from ma-tech/develop-bill

Develop bill
Update installation instructions for MATLAB

- Point at the bfmatlab.zip bundle available from the downloads page
Improve readability of alternative script hyperlink
Separate the download link from the artifact names
Ignore trailing slash when reading fake directories

See ticket #11330.
Fake: make sure that files are always listed in alphabetical order

Since only the last file in multi-file SPW datasets is used to
determine dimensions, it's important to always use the last file
alphabetically.  Otherwise, plates, wells, and/or fields could be
ignored.

Fixes ticket #11330.
cpp: Correct ome/compat/cstdint.h include guards