Reduce disruption during updateCollation.php

Have updateCollation.php order by cl_to, so that each category is
updated all at once. This minimises the time during which a category
will appear to be incorrectly sorted, while the maintenance script is in
progress.

Mark the cl_collation index as needing deletion, it was always pretty
pointless. You can't do much better than a full table scan when you're
changing the collation value on a wiki.

Increase the batch size since the lack of a cl_to,cl_from index means
that it will have to filesort each category. A larger batch size means
less sorts. As noted by Liangent on bug 45970, you can't order by
cl_sortkey since that will change during execution.

Also fix an inappropriate use of $wgMiserMode and remove a no-op from
the SET clause of the UPDATE.

Very lightly tested.

Also cherry-picked I803f20bc

Change-Id: Ia8791b2578db0a6e59b5295e88e043a08a1a4c43