Updated docs to explain there are no log files

Used Caridy's explanation from https://github.com/yahoo/mojito/issues/1025#issuecomment-15270635 to call out that there are no log files.
upgrading to 3.9.1 to solve the issue with handlebars
Merge pull request #1048 from caridy/yui-390

upgrading to 3.9.1 to solve the issue with handlebars
fix functional tests
Merge pull request #1049 from ekashida/fix-functional

fix functional tests after refactor on tunnel
History edits for 0.5.7
prepend blank @VERSION@ boilerplate
Merge pull request #1052 from isao/release

History edits for 0.5.7
release 0.5.7 (based on 0.5.6-39-ge3156ad)
Merge pull request #1045 from lexander/patch-1

Updated docs to explain there are no log files
Rewriting a paragraph given in a PR for noting that Node.js handles what happens to log messages after receiving them from Mojito.
rm redundant preload() in failing test
use page object to store/use staticAppConfig
encorporating feedback from PR
Merge pull request #1056 from drewfish/dispage

use page object to store/use staticAppConfig
Added a deprecation message and links to the Shaker GH repo and docs.
Made a copyedit.
Merge pull request #1057 from zhouyaoji/docs_deprecate_compile

[docs] Deprecated documentation for the `compile` command and linked to the Shaker docs.
partial fix issue #1053; bundles without locations err on path.join()
partial fix issue #1053; test unset path part data

also changed mock conf to always start with a clean copy