Update POM including ImputationTool project (instead of .jar) as a dependency
Remove old ImputeToTriTyper class
Fix three times same test in ImputeToTriTyperV2
Merge branch 'master' of https://github.com/molgenis/systemsgenetics.git
Set default regex for chromosome number detection in ImputeImputedToTriTyperV2
Small fix in TriTyperToPlinkDosage
This should make the GLM (interaction model) applied in the Cell Type specific analysis actually less 'specific' for cell type specificity analysis :)
Increase performance of TriTyperToPlinkDosage converter
Merge branch 'master' of https://github.com/molgenis/systemsgenetics.git
One regex to rule them all!
Slight adjustmends to ViolinBoxPlot
Add SNP subset export to ImputationTool
Small NullpointerException bugfix in TriTyperToPedAndMapConverter
Merge branch 'master' of https://github.com/molgenis/systemsgenetics.git
Merge pull request #124 from MatthieuBeukers/master

eQTL Functional Enrichment
Better error handeling genotype aligner
Handeling of SNP alleles
Minor bugfix in MixupMapper
Merge branch 'master' of https://github.com/molgenis/systemsgenetics.git
Merge pull request #125 from harmjanwestra/master

Lots of minor fixes
Minor bugfix in file handeling of normalizer