Proteomics: Morpheus fixes for /usr installs (was working for Galaxy tool install).
Proteomics: Update to latest msconvert.
More debconf work toward fully automated install.
Proteomics: Add more required packages for RVM.
Proteomics: Specify absolute path for Galaxy-P tools file so it works with deployer. Also allow the path to be overridden with galaxyp_tool_conf.