Switched over to modified nix-vector-routing to speed up simulations.
Modified nix routing to not flush caches.
Added support for internal vs. external regions to be contacted.
Minor bug where we printed twice the number of links that were really being killed (counted ifaces).
Added rocketfuel trace files just in case.
Added pythong script for combining all latency files into one.
Added city_counts script and 3 new large ASes to run_ron_sims.sh
Fixed a bug in simulator causing null pointers and added the new topologies to run script.
Added support for 2-sample t-test on num acks.
Updated analyzer to show means and use only indirect acks for t-test.
Almost finished moving over to the more modular simulation approach.  Still need to get the .sh script working, finish setting sim parameters, and remove the reliance on adding an extra node for the server, it isnt needed!
Almost have the new switchover working: just need to get server ACKing.
Hacked the adding an extra node for the server thing back in but need to get the unfailing working.
Got the run loop working, but need to handle resetting applications to finish the unfailing.
Finished creating objects for (but didnt test or fully complete implementation of) the new heuristic and peer objects.
Got it to compile finally.  Combined all heuristics into one header and one code file as deriveds are super short.
Added mobility stuff and removed all MDC stuff from this branch.
Transferring to new computer...
Merged geocron branch.