Merge pull request #12 from MengZhang/develop

Develop pull request from meng
Updated dependencies and fixed DOME bug

* Updated translator dependencies
* Fixed DOME case bug
* DEBUG logging enabled
Cleaed up default output
Merge branch 'cli-integration' into develop

*Added support for CLI logging
Enabled DEBUG logging

DEBUG logging for develop branch.
Prepare for release 1.1e
Merge branch '1.1e' into develop
Update dependencies

* Update dome to 1.1.1
* Update agmip-core to 1.0.1
* Update translator-dssat to 1.2.3
* Update translator-generic-csv to 1.1.2
Merge branch '1.1e' into develop
Bumped to next development version
Updated dependencies
Bump dependencies to releases