[dev] Updated dev branch with most recent svn files.
[dev] Attempt at .gitignore.
[dev] Updated readme.md.
[dev] Updates for new tov_eos.
[dev] Adding boundary pressures for gen_quark model.
[dev] Small documentation updates.
[dev] Some fixes for no source runs.
[dev] Updated to store command-line arguments for posterity.
[dev] Moved setting of run_args.
[dev] Some misc. doc fixes and moved mcmc_init() to use scr_out.
[dev] Doc fixes and added new first_point() function.
[dev] Doc fixes and reworked input file mechanism.
More doc fixes and small updates. Updated git ignores.
Renamed hist_size and removed old histogram objects.
[dev] Temporary hack for first_point.
[dev] Fixed hack in fixed-point and doc fixes.
Fixed bad step recovery exception.