[FIX] Fixing warning in test_align_gaps.h

git-svn-id: http://svn.seqan.de/seqan/trunk@14471 e6417c60-b987-48fd-844e-b20f0fcc1017
[FIX] Updating output of extendAlignment() demo.

git-svn-id: http://svn.seqan.de/seqan/trunk@14472 e6417c60-b987-48fd-844e-b20f0fcc1017
[FIX] Adding missing example.vcf.

git-svn-id: http://svn.seqan.de/seqan/trunk@14473 e6417c60-b987-48fd-844e-b20f0fcc1017
[FIX] Addendum to [14456] which forgot to update the gold standard GTF.

git-svn-id: http://svn.seqan.de/seqan/trunk@14474 e6417c60-b987-48fd-844e-b20f0fcc1017
[FIX] Fixing FileStream compile issue on Windows.

git-svn-id: http://svn.seqan.de/seqan/trunk@14475 e6417c60-b987-48fd-844e-b20f0fcc1017
[FIX] shift-overflow warnings removed

git-svn-id: http://svn.seqan.de/seqan/trunk@14476 e6417c60-b987-48fd-844e-b20f0fcc1017
[FIX] shift-overflow warnings removed (ii)

git-svn-id: http://svn.seqan.de/seqan/trunk@14477 e6417c60-b987-48fd-844e-b20f0fcc1017
[FIX] Fixing demo tests on Windows.

git-svn-id: http://svn.seqan.de/seqan/trunk@14478 e6417c60-b987-48fd-844e-b20f0fcc1017
[FIX] wrong line number in _compareTextFilesAlt()

git-svn-id: http://svn.seqan.de/seqan/trunk@14479 e6417c60-b987-48fd-844e-b20f0fcc1017
[NOP] clean-up of Modifier shortcuts

git-svn-id: http://svn.seqan.de/seqan/trunk@14480 e6417c60-b987-48fd-844e-b20f0fcc1017
[FIX] replaced length with empty

git-svn-id: http://svn.seqan.de/seqan/trunk@14481 e6417c60-b987-48fd-844e-b20f0fcc1017
[FIX] Fixing warning for fx_fastq_stats.


git-svn-id: http://svn.seqan.de/seqan/trunk@14482 e6417c60-b987-48fd-844e-b20f0fcc1017
[FIX] Adding missing fai file.

git-svn-id: http://svn.seqan.de/seqan/trunk@14483 e6417c60-b987-48fd-844e-b20f0fcc1017
[FEATURE] Adding tag gkn-ignore and file-ext-override to CTD.

git-svn-id: http://svn.seqan.de/seqan/trunk@14484 e6417c60-b987-48fd-844e-b20f0fcc1017
[FIX] Fixing demo test on Windows.

git-svn-id: http://svn.seqan.de/seqan/trunk@14485 e6417c60-b987-48fd-844e-b20f0fcc1017
[FIX] Fixing syntax error in CMake file.

git-svn-id: http://svn.seqan.de/seqan/trunk@14486 e6417c60-b987-48fd-844e-b20f0fcc1017
[FIX] removed warnings

git-svn-id: http://svn.seqan.de/seqan/trunk@14487 e6417c60-b987-48fd-844e-b20f0fcc1017