Updating existing controllers to make it cleaner and easy to pickup the project, updated jQuery and started moving CSS to base file making the layout and colors final.
Another round of cleanup and development updates.

Removed unused files to prevent confusion.
Updated Cards, Projects, Users and Site controllers as well as their views.
Stabilized design and shown information.
Added exceptions for methods that are still placeholders and do not provide any functionality.
Added a documentation skeleton to try and give some useful info about how the system was thought.
Cleaned commented code, added comments, did general updates.