Merge branch 'develop' of git://github.com/openmicroscopy/bioformats into spec2013
Updating transform file to include 2013-06

NOTE: 2012-06 still marked as current
Removing mention of logical channel
Adding reason for NominalMagnification type change
ND2: populate the channel color

Fixes #10530.
ND2: fix T size adjustment

Fixes #10526.

Conflicts:

	components/bio-formats/src/loci/formats/in/NativeND2Reader.java
Fix compile errors
merge develop -D org -I include -E exclude: PR 159 (Improve .ndpi support)
merge develop -D org -I include -E exclude: PR 351 (Add SPW support to FakeReader)
merge develop -D org -I include -E exclude: PR 421 (Documentation for new Imspector format)
merge develop -D org -I include -E exclude: PR 424 (Specification changes for 2013-06 release)
merge develop -D org -I include -E exclude: PR 433 (More .nd2 fixes (rebased onto develop))