Merge pull request #1 from openworm/development

Development
the manifest is set to be ignored in git ignore but it's also in the
remote repository and it messes up things when synchronizing the project
Fix for issues loading/starting simulation.
Merge pull request #2 from openworm/development

Release 0.0.4
Merge pull request #3 from openworm/development

Release 0.0.5-alpha
implementing new ISimulator interface
updated TODO comments
declared dummy forceable / watchable variables
refactoring of variable model and pojo
Refactored data model
Merge remote-tracking branch 'origin/api-console' into development