put the + symbols back in lpmdformat.cpp
Initial commit of PHP compiled via cmake.
Fix filename.
Fix building of PHP module. Ignore undefined symbols, since they're loded by PHP.
Remove PHP library searching by cmake, since it's not used. Remove files generated by SWIG.
Add example file.
Switch PHP example to SVG - it's the useful part. Include proper openbabel.php
Initialize lattice factor to 1.0 in PWSCF reader.
Merge pull request #9 from dlonie/fix-pwscf-reader

Initialize lattice factor to 1.0 in PWSCF reader.
Add /usr/local/include as a search path for InChI headers.
Fix static build linking to InChI

Typo reported by Igor Fillipov to the mailing list.
Fixes from Fulvio Ciciaco for coordinate parsing.

Some coordinates have "Reduced coordinates (xred)"
which means there are still 3 (non integer) tokens.
Also includes fixes for coordinate starts.
Fixed crash when parsing abinit output.

Ron Cohen contributed a patch for when the typat line extends
to more than one line. Also includes misc. fixes.
Merge remote branch 'upstream/master' into php-binding
Trivial fix for compilation under MSVC 2012
Fix for problem reported by Pascal Muller on mailing list. Calling DeleteAtom for a non-H atom invalidates any associated stereo.
LPMDformat:
1. Get rid of warning messages about registering by not registering anything
2. Improve/fix documentation string.
3. Option 'e' is now a boolean as "-e 0" didn't actually do anything.
4. Fix memory leak caused by use of 'new'.
5. 'extra' variable replaced by boolean 'charge' for clarity.
API extension: mol.AddAtom(atom) is now mol.AddAtom(atom, bool forceNewId=false) (preserving old behavior)

This is needed as molA += molB previously modified the atom Ids in molB by setting them all to NoId (there was no other way to pass the information into AddAtom).

(Rather than extend the API, an alternative approach would be to restore the atom Ids in molB after calling AddAtom.)
Copy the stereo when using expressions like mol += molB.
Merge branch 'master' of https://github.com/openbabel/openbabel