test for FragmentUtils.traverse()

Change-Id: Iae429248091e724af7d7da1e8176d15927e7d796
Signed-off-by: Egon Willighagen <egonw@users.sourceforge.net>
unit tests for MurckoFramgnter.getFrameworksAsContainers

Change-Id: I40d21f02abb6b35395fefd55a4817873b031b170
Signed-off-by: Egon Willighagen <egonw@users.sourceforge.net>
unit test for MurckoFragmenter.getFragmentsAsContainers

Change-Id: Ia16de7e7874e5db37d61f8e5971cd5a5906a4a9d
Signed-off-by: Egon Willighagen <egonw@users.sourceforge.net>
replacing implementation with interface

Change-Id: Ic17062bbf2c5099873f921a38d1b13656763ef75
Signed-off-by: Egon Willighagen <egonw@users.sourceforge.net>
corrected long broken unit test, the test was likely broken due to changes in the Fingerprinter… the new test does not depend on the output from Fingerprinter being preserved and isolates the test with bit sets. An additional method was added to perform the more intuitive differences both ways opposed to just the differences one way.

Change-Id: Iab728fe9a1549a498384c2734f1d66cc0f342357
Signed-off-by: Egon Willighagen <egonw@users.sourceforge.net>
only rebound atoms (and clear existing bonds) if the option is set

Change-Id: I30fd9cbd37923b7db83afefbb2fdc42cbe886c73
Signed-off-by: Egon Willighagen <egonw@users.sourceforge.net>