KnowledgePathHelper and updates in AnnotationProcessor
Merge remote-tracking branch 'origin/newgen' into newgen-iliasg
Merge remote-tracking branch 'origin/newgen' into newgen-iliasg

Resolved Conflicts:
	jdeeco-core/src/cz/cuni/mff/d3s/deeco/annotations/processor/AnnotationProcessor.java
	jdeeco-core/src/cz/cuni/mff/d3s/deeco/task/KnowledgePathHelper.java
Merge remote-tracking branch 'origin/newgen' into newgen-iliasg
Merge pull request #110 from d3scomp/newgen-iliasg

KnowledgePathHelper complete with tests
Merge pull request #113 from d3scomp/newgen-keznikl

runtime and scheduler updates
Javadoc for annotation packages and some clean up
Merge remote-tracking branch 'remotes/origin/newgen' into newgen-iliasg
Exception handling in more corner cases in AnnotationProcessor
small fix and a TODO
containers comments and FIXME in ShadowKnowledgeManagerRegistry
Merge pull request #115 from rima-alali/newgen

Please avoid committing .classpath unless really necessary. Also, check your autoclrf settings of GIT and the line endings of your files to avoid committing change sets involving whole files (all your changes cover the whole files, so each line of the files you committed appears as changed and may lead to significant conflicts, please check this every time before committing since it is really hard to revert it once you do that).

containers comments and FIXME in ShadowKnowledgeManagerRegistry
Merge pull request #114 from d3scomp/newgen-iliasg

Javadoc + Clean Up + some additions
javadoc added in AnnotationProcessorException
Merge pull request #116 from d3scomp/newgen-iliasg

javadoc added in AnnotationProcessorException
comments on ShadowKnowledgeManagerRegistry
comments on ShaowKowledgeMnagerRegistry
comments on ShadowKnowledgeManagerRegistry
trying to use PMD
Update README.md