Release log update
Encode release log update
updated links to APPRIS, which now requires a species name
Merge branch 'master' of hgwdev.cse.ucsc.edu:/data/git/kent
realTime.csh now checks hgw6 instead of 8, since 8 is going away refs #8132
Merge branch 'master' of jcasper@hgwdev.cse.ucsc.edu:/data/git/kent
Fixing bug reported by user in MLQ #11401.  I missed a corner case:
it's getFinestBin's job to set self->gotFinestBin, *but* nextRowFiltered
calls nextRowRaw in a loop to skip past rows that precede minChrom,minEnd.
nextRowRaw (nextRowFromBuffer) calls asdDoQueryChunking when it hits the
end of the buffer, which it does when the entire buffer's contents precede
the new minChrom,minEnd.  In that case, getFinestBin is still waiting for
a row so it has not yet set self->gotFinestBin.  So before calling
asdDoQueryChunking, nextRowFromBuffer needs to update self->gotFinestBin.
While fixing that, I noticed that nextRowFromBuffer wasn't considering
that rowBuf->size might be 0 if the query returns no rows.
refs #11401
Added gadMor1 to ensGeneDb and ensGeneScaffold groups for Ensembl Genes v72 release (redmine #11114)
Merge branch 'master' of steve@hgwdev.cse.ucsc.edu:/data/git/kent
Merge remote-tracking branch upstream/$:{upbranch}