Remove some redundant information from docs.
fix typo same => sam
Edit the help to reflect that this isn't the real Picard SamToFastq command.
Add a command wrapper for the unmodified picard "SamToFastq" command.
Use Picard to convert the merged BAM into two FASTQs directly.

Additionally, this re-reverses negative-strand reads back to their
original version and doesn't print duplicate reads for multiple
alignments.
Add observer for error_message to send errors to syslog via Log4Perl
Clean up Log4Perl output

Don't print to the screen

Print the class name of the thing the error is being called on
Merge branch 'syslog'

error_message()s are now sent to syslog via Log4Perl