Clean up dead code in boundary_realignment.py
Temporary changes to allow rapid debuging.
Hack to get around apparent Freesurfer bug where the Corpus Callosum
region of DKT40 annot labels are '3' instead of '0'.
Temporary changes to allow rapid debuging.
Hack to get around apparent Freesurfer bug where the Corpus Callosum
region of DKT40 annot labels are '3' instead of '0'.
Trying a lower iteration count to see if that helps deconfuse things.
Adding file to propagate fundus lines to tile the cortex.
Merge remote-tracking branch 'origin/ohinds-realignment' into ohinds-realignment

Conflicts:
	mindboggle/labels/boundary_realignment.py
Finding endpoints almost works, working on connecting via shortest paths.
Filled out implementation of shortest path, needs testing.
A little more shortest path work.
Done with sortest path connection complete relabeling. Doesn't work
very well.
Merge branch 'master' of github.com:binarybottle/mindboggle
Merge branch 'ohinds-realignment'