Merge pull request #1 from martinghunt/master

Initial add of all files
Merge pull request #2 from martinghunt/master

modified init file so that 'import fastaq' works; removed unecessary debug print statement
Merge pull request #3 from martinghunt/master

Removed debugging print
Merge pull request #4 from martinghunt/master

New script fastaq_make_random_contigs; added funciotanlity to replace sections of bases within sequences
added support for reading fasta from gff3 files
Added support for reading fasta seqs from embl file
added support for reading fasta seqs from phylip files
removed debugging prints
added task to_fasta
added Fasta method strip_after_first_whitespace
added option to strip everything after whitespace in to_fasta()
added script fastaq_to_fasta
tidied up usage instructions
Merge pull request #5 from martinghunt/conversions_to_fasta

Conversions to fasta