ByPattern now returns sets
Javadocs
Read different URI and init
Short UriPatterns
regex work in progress
Bug fix for mapBySet near self mappings
Merge branch 'develop' into Christian
Removed synchronized
Updated Readme
cleaned up mysqlConfig.sql
Add missing properties file
Merge branch 'develop' into Christian

Fixed Conflicts:
	org.bridgedb.sql/src/org/bridgedb/sql/SQLIdMapper.java
	org.bridgedb.uri.sql/src/org/bridgedb/sql/SQLUriMapper.java