switched the large Cremona ellcurve database to the new git directory layout
module_list: don't link against atlas on OSX

OSX's Accelerate framework no longer pretends to
be atlas as of 10.9
scipy: define __ACCELERATE__ on OSX

Upon every new release of OSX, there is always
a delay before upstream deals with changes to the
headers. Defining __ACCELERATE__ works around the
most common incompatibilities.
gcc: workaround g++ and OSX 10.9's cdefs.h header incompatibly
sqlite3: don't install by default on OSX

Beginning with 10.9, Apple's CoreData framework
depends on some non-standard sqlite modules. Since
we set *_LIBRARY_PATH, this causes issues for R,
which relies on CoreData.
build/install: add missing ;
gcc: version bump to force rebuild on OSX 10.9
build/install: add comment explaining why we don't build sqlite on OSX
sqlite: move platform disabling to spkg-install like atlas and cephes
remove --sqlite3 option if sqlite is not installed
symlink system sqlite3 on OS X
gcc: fix comment typos in install script
remove a couple of now unused lines
Trac #14481: document the new workflow

The new git based workflow has been more or less figured out, now it
just needs to be documented.

URL: http://trac.sagemath.org/14481
Reported by: ohanar
Ticket author(s): Volker Braun
Reviewer(s):
Trac #14482: create the new development scripts/library

In order to switch to the new workflow, we need to create a set of
development scripts for interfacing against git and trac. We use
https://github.com/sagemath/sage-workflow/issues to keep track of
issues.

URL: http://trac.sagemath.org/14482
Reported by: ohanar
Ticket author(s): Robert Bradshaw, David Roe, Julian Rueth, R. Andrew
Ohana, Martin Raum, Timo Kluck
Reviewer(s): Volker Braun
Trac #14962: make sure all optional packages work in the git repository

we support them, so we need to make sure they will continue to work

Script to systematically try out all optional spkgs: http://boxen.math.w
ashington.edu/home/vbraun/Sage/Testing/test_optional_packages.sh

The optional databases will be dealt with here, other packages should
make separate tickets. Use the following new "upstream" tarballs:
* http://boxen.math.washington.edu/home/vbraun/upstream/database_cremona
_ellcurve-20121022.tar.bz2

Move to experimental (broken with or without git, probably for a long
time):
* fricas (doesn't build with our ecl)
* fricas-aldor (dito)
* libcocoa (doesn't build with our gmp/mpir)

Delete because no copyright information (ask again on sage-devel first):
* cunningham_tables
* database_jones_numfield
* database_kohel
* database_odlyzko_zeta
* database_sloane_oeis
* database_stein_watkins_mini.p0

Delete for other reasons:
* jsmath_image_fonts (we switched to mathjax)

URL: http://trac.sagemath.org/14962
Reported by: ohanar
Ticket author(s): Volker Braun
Reviewer(s):
Trac #15401: Build git without gettext if necessary, spkg-check sanity

The git spkg fails to build if gettext is not installed, see
https://groups.google.com/d/msg/sage-devel/RAWInaDhz5c/lQYXrKQ4aXEJ

We should try again without gettext if necessary.

Also, clean up spkg-install/spkg-check.

URL: http://trac.sagemath.org/15401
Reported by: vbraun
Ticket author(s): Volker Braun
Reviewer(s):
Trac #15420: Borken git doctests.

Github master, at 094712a285895ceac4c1521fb04cc9cc343a4b3a (head)

http://patchbot.sagemath.org/log/0/Ubuntu/12.10/x86_64/3.5.0-17-generic/
pi/2013-11-14%2002:54:22%20-0800?short

Looks like we just need to sort this list.

URL: http://trac.sagemath.org/15420
Reported by: robertwb
Ticket author(s): Robert Bradshaw, R. Andrew Ohana
Reviewer(s): R. Andrew Ohana
Trac #15430: Enable cython caching

The entire Sage library fits into about 25MB (compressed) cache.

URL: http://trac.sagemath.org/15430
Reported by: robertwb
Ticket author(s): Robert Bradshaw
Reviewer(s): Volker Braun
Trac #15436: Cksum uses tabs instead of spaces, breaking sage-spkg's regex

If neither shasum nor md5sum/md5 is available, then we fall back to
cksum for package checksums. This only during adventures in retro
computing, i.e., Solaris. This patch fixes the regex to work even with
the broken Solaris sed.

URL: http://trac.sagemath.org/15436
Reported by: vbraun
Ticket author(s): Volker Braun
Reviewer(s):