FTUV bug fix

Added text for the first section of the appendix detailing bug fixes
performed for FTUV
Bug fix - ctrans

Appendix D2: Convective transport of tracer
Also fixed reference to Wong et al 2013 in Appendix C
Namelist appendix

Added appendix for namelist

Minor changes to ftuv bug fix appendix
Ch 1 + mcb

Iteration 1b. Still need to add lightning trigger section
Namelist appendix updates

Table width adjustment
split (h,v)_(mon|sca)_adv_order into two entries
Updated certain namelist descriptions
Ch 1 extend lightning

Extended lightning section to include introduction to lightning physics
and survey of LNOx parameterization studies

Misc updates:
Updated reference code for EPA's definition of VOC
Moved MCS miltipole figure up
Added OTD to appendix plist
DFS/OTD abbrev

Added abbreviations for DFS and OTD
Merge branch 'Appendix'
Merged Appendix to Chapter 1

Merging Appendix to Chapter 1 to get namelist and lnox doc appendices
iteration 1c lightning physics

MCB proofread of section 1.2.1 on the overview of lightning physics.
This version will be distributed to DCN as iteration 1d.
Iteration 1d edit

Minor edits based on dcn's comments
Added 1.3 as summary for chapter 1
Expecting to proceed to iteration 2 (committee distribution) and
merging to master after further approval for edits
Ready for iteration 2

Further edits in summary section per dcn's suggestions.
Ready for merging to master and iteration 2/committee distritbuion
Merge branch 'Chapter-1'

Conflicts:
	Appendix/bugfixes.tex