Added proper uncertainty to data in update.FM.model
Merge pull request #14 from EcoForecast/master

Updating my branch with Angela's recent additions.
update.FM.model include proper uncertainties.
Using Angela's find.extreme.GCC.NDVI
Merge pull request #64 from dgianotti/master

Particle filter now has process error and proper uncertainty on data.  No resampling still.
Added script for plotting all site data. Fixed some SS parameters and priors.
Merge pull request #65 from dgianotti/master

Added script for plotting all site data. Fixed some SS parameters and priors.
Merge pull request #10 from EcoForecast/master

Updating repository
Bug fixed in site ID numbers.
Merge pull request #67 from AngelaRigden/master

fixed bug in site id numbers
when finding the min/max of each station, we switched to take the median instead of mean (to decrease weights in outliers). took out 0-1 bound.
Merge pull request #68 from AngelaRigden/master

when finding the min/max of each station, we switched to take the median...
1. find extreme values: now taking the median of the median of each year. (some years have VERY little data in one jan/feb and jul/aug)

2. fixed a bug update FM
Merge pull request #69 from AngelaRigden/master

1. find extreme values: now taking the median of the median of each year...
fixed another bug (one site had NO data for jan/feb at all ever)...

the state space model now works for all site!!!!!!!
WOO HOO!!
Merge pull request #70 from AngelaRigden/master

fixed another bug (one site had NO data for jan/feb at all ever)...
This file runs the model WITHOUT downloading any of the data (steps are commented out)
Merge pull request #71 from AngelaRigden/master

This file runs the model WITHOUT downloading any of the data
We accidentally deleted the correlations and MCMC diagnostics for the state space model, so we need to add these back in...they are in a separate file for now until we add them
Merge branch 'master' of https://github.com/EcoForecast/PhenologyForecast