Revert "added notes"

This reverts commit 5132f877afccb6aef02d8c71435ba69557ee6101.
Data manipulation
Wrote code to create SummaryBirthYearByTime.csv

so proportions won't have to be hard coded in the *.R file.
Renamed directory to 'DiffusionOnly'

It used to be  'OneShot_Only1984Diffusion'
Diffusion.R reads from data file

instead of hard-coded proportions
Diffusion report markup
Created folder for contagion
ContagionBeta converging
Model Specification

in MS Word and in MathType formats
Contagion model written & running
Renamed formula document

and saved to PDF
transition counts corrected

this correction is provisional until the data is verified
hybrid specification for WinBugs

dont' worry about line 11
(Tai * pi[i] * pow(pa[i],Cai))
the order of the predictors is switched from Contagion
(Tai * pa[i] * (pi[i])
in order to make C-parameter reduce the equation properly in this bit of
the specification
Reran diffusion -keeps unique figures
Reran diffusion -completed
Saved Contagion & diffusion results as PDFs
temp files deleted
working on hybrid beta
Worked on Hybrid.R

It now writes chains to CSV in the data folder.
created .rmd for Hybrid

modified the copy of Contagion