Shell script for hotfix release.

Change-Id: Iac96b8e99deaf9c1c3c44f1063a2a16f0a1c7557
Deploy script added.  This needs some updates to run on everyone's
machine.

Change-Id: I5520bf15946a9453d18a41c63bc85081d73690f8
update script modified.  Not working yet.

Change-Id: I21a414278a7b8e3312548c5f546247066950644d
Options had been added to the deploy script.

Change-Id: Iaa2cb7f009d2a7d2e4520a3fe1c8e4e915904684
Cleanup function added.

Change-Id: Id9e4ea1a91cacea0997dc5877a417a0775433db9
release script updated.  Now supporting misc. tasks including manual and
splash screen update.

Change-Id: I451ee285d620c34765af4876a5495a4b50177713
First working version for hotfix release.

Change-Id: Ib867aaf1608978099f518ed39a7c6cfcd94daf9f
First working version of release script.

Change-Id: I9c24560203150a28f1f63237b9ede6a30bb32b7e
release script updated.

Change-Id: I94975924a720dce4142b0a472060aad2c8edbc2c
Custom initialization script added for core developers.
Scripts had been moved to cytoscape-scripts repository.
Recommitted changes that somehow got lost (again!)

Change-Id: Icd2a7d7972a8b65ac75be2e714d7fc7b2bd0c6db
Removed samples from repository list
Updated for cy script v1.2.0.
README updated (instruction about maven version).
Reordered top-level pom so that app-developer is built after its dependencies

Change-Id: I359ae41b027bb29c563dcc775f3c88e6bf1f6f82
Child projects have been added to .gitignore file.