Merge pull request #1 from tigerw/bugfixes

Bugfixes branch merge
Merge pull request #2 from tigerw/bugfixes

Bugfixes
APIDump: Documented the cBoundingBox class.
APIDump: Updated cClientHandle documentation
Removed cChunkDesc::SetChunkCoords() from Lua API.
APIDump: Updated cChunkDesc docs.
APIDump: Updated cBlockArea docs.
APIDump: completed cChestEntity docs.
APIDump: Completed cCraftingGrid's documentation.
APIDump: Completed cCuboid docs.
APIDump: Documented cServer
Fixed a typo in cEntity doxycomments.
APIDump: Updated cEntity docs.
Minor startup streamlining

* LOGD'd unneeded debugging messages, streamlining startup
+ Added a basic timer for how long in seconds it took to start up
+ Added two checks for plural (plugin/s, second/s)
Updated README

See for yourself :)
APIDump: Added the possibility to ignore classes. Ignoring Lua builtins.
APIDump: Linkified cDropSpenser constants.
APIDump: Added more inheritance and linkification.
APIDump: Fixed overloaded functions' docs.
Improvements to startup timer

As suggested by xoft. Also reverted changes of displayed protocol
version.