First commit for version that will be synced with git hub
Look I commited
A commit from work.
Merge github.com:soam5515/Lenda
Now has the stuff in src folder.  has the TChain feature that allows for input root files in parts
The scripts and makefile have been added to git.  The source files are now in ./src and the include files are in the include directory.

The main script is running the software cfd and is working well.
It now has the compatability with process script and requires a second number in addition to run number when calling for many files

./EvtBuilder runNumber [numberOfInputFiles]

If number of input files is 1 it can be ommited

Need to change the metta script account for many input files.
And the main file hadn't been added yet.  Good job.

updated meta script to have input checks and helpfull messages.  Updated the input
parsing in EvtBuilder to work with new meta script and multiple input file stuff.
Changed process script to make symbolic links to root files instead of copying them over
Input option updates I think
Fixed the output file names having the number of files at the end instead of just 00
Commit after that double counting bug was found.  Code still needs some clean up
First version with the trace fitting feature.  Right now is basing timing off
of the mean value of a gaussian fit pulse.  The range for the fit is restricted
to the area around the maximum of the pulse.  The fast filter calls have been
commented out and the current "SoftwareCFD" is coming from the fitting.
removed the object files from tracking.  Minor changes to the trace fitting function.
Stated some clean up.  Moved input parsing to InputManger.  New call system is

./EvtBuilder runNum option:argument
example to run event 267 for 4 files with trace fitting
./EvtBuilder 267 numFiles:4 timingMode:traces
CHanged the  timmingMode option from "traces" to "fitting"

Got rid of reference to the useSoftWareFilters bool in the line that overwrites the timing.
Add the scripts to the repo.  Plot.C script.C FindSpot.C and fitting_meta

the input manager and fitting methods seem to be working.  process now emails you
when it is done.
Changed the correlated event triggering conditions.  Instead of the complicated searches in a window of 6

it is now restricted to a window of 4 and sorts the information based on channel number.  This aviods the
necessity to check to make sure you are subtracting the same PMT each time.  The main conditions are:
All 4 channels have to be present in the set of 4.  The average of the two bar's times has to be less then
10 clock tics
Only writes output tree for good events
Process has the build line defaulted to softwareCFD now.  The Builer has the begiinings of corrections built in.  Also has some extra histograms.  Still has that <4 catch in the channel checker function.  Note to self.  Commit more.
Adding skeleton for correction manager class